logging tuned to remove unused messages

converter-SBGNML/src/test/resources/log4j.properties

@@ -17,4 +17,29 @@ log4j.appender.R.layout.ConversionPattern=%d %5p [%t] (%F:%L) - %m%n
 
 log4j.logger.org.springframework=warn
 log4j.logger.org.hibernate=warn
-log4j.logger.lcsb=debug
\ No newline at end of file
+log4j.logger.lcsb=debug
+
+log4j.logger.lcsb.mapviewer.model.map.species.ElementComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.SpeciesComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.SimpleMoleculeComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.ProteinComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.AssociatedElementComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.ComplexSpeciesComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.AssociatedElementComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.PhenotypeComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.fields.AssociatedElementComparator=info
+
+log4j.logger.lcsb.mapviewer.model.map.layout.alias.SpeciesAliasComparator=info
+log4j.logger.lcsb.mapviewer.model.map.layout.alias.AliasComparator=info
+log4j.logger.lcsb.mapviewer.model.map.layout.alias.ComplexAliasComparator=info
+log4j.logger.lcsb.mapviewer.model.map.layout.alias.CompartmentAliasComparator=info
+
+log4j.logger.lcsb.mapviewer.model.map.reaction.ReactionNodeComparator=info
+log4j.logger.lcsb.mapviewer.model.map.reaction.ReactionComparator=info
+log4j.logger.lcsb.mapviewer.model.map.reaction.NodeOperatorComparator=info
+log4j.logger.lcsb.mapviewer.model.map.reaction.AbstractNodeComparator=info
+
+log4j.logger.lcsb.mapviewer.model.map.model.ModelComparator=info
+
+log4j.logger.lcsb.mapviewer.common.comparator=info
+log4j.logger.lcsb.mapviewer.model.graphics.PolylineDataComparator=info
\ No newline at end of file

converter-sbml/src/test/resources/log4j.properties

@@ -19,3 +19,28 @@ log4j.logger.org.springframework=warn
 log4j.logger.org.hibernate=warn
 log4j.logger.lcsb=debug
 log4j.logger.lcsb.mapviewer.common.comparator=info
+
+log4j.logger.lcsb.mapviewer.model.map.species.ElementComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.SpeciesComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.SimpleMoleculeComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.ProteinComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.AssociatedElementComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.ComplexSpeciesComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.AssociatedElementComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.PhenotypeComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.fields.AssociatedElementComparator=info
+
+log4j.logger.lcsb.mapviewer.model.map.layout.alias.SpeciesAliasComparator=info
+log4j.logger.lcsb.mapviewer.model.map.layout.alias.AliasComparator=info
+log4j.logger.lcsb.mapviewer.model.map.layout.alias.ComplexAliasComparator=info
+log4j.logger.lcsb.mapviewer.model.map.layout.alias.CompartmentAliasComparator=info
+
+log4j.logger.lcsb.mapviewer.model.map.reaction.ReactionNodeComparator=info
+log4j.logger.lcsb.mapviewer.model.map.reaction.ReactionComparator=info
+log4j.logger.lcsb.mapviewer.model.map.reaction.NodeOperatorComparator=info
+log4j.logger.lcsb.mapviewer.model.map.reaction.AbstractNodeComparator=info
+
+log4j.logger.lcsb.mapviewer.model.map.model.ModelComparator=info
+
+log4j.logger.lcsb.mapviewer.common.comparator=info
+log4j.logger.lcsb.mapviewer.model.graphics.PolylineDataComparator=info
\ No newline at end of file

model/src/test/resources/log4j.properties

@@ -18,7 +18,7 @@ log4j.appender.R.layout.ConversionPattern=%d %5p [%t] (%F:%L) - %m%n
 log4j.logger.org.springframework=warn
 log4j.logger.org.hibernate=warn
 log4j.logger.lcsb=debug
-log4j.logger.lcsb.mapviewer.model.map.ElementComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.ElementComparator=info
 log4j.logger.lcsb.mapviewer.model.map.species.SpeciesComparator=info
 log4j.logger.lcsb.mapviewer.model.map.species.SimpleMoleculeComparator=info
 log4j.logger.lcsb.mapviewer.model.map.species.ProteinComparator=info

pathvisio/src/test/resources/log4j.properties

@@ -18,5 +18,28 @@ log4j.appender.R.layout.ConversionPattern=%d %5p [%t] (%F:%L) - %m%n
 log4j.logger.org.springframework=warn
 log4j.logger.org.hibernate=warn
 log4j.logger.lcsb=debug
-#log4j.logger.lcsb.mapviewer.model=info
-#log4j.logger.lcsb.mapviewer.wikipathway.model.Graph=info
+
+log4j.logger.lcsb.mapviewer.model.map.species.ElementComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.SpeciesComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.SimpleMoleculeComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.ProteinComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.AssociatedElementComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.ComplexSpeciesComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.AssociatedElementComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.PhenotypeComparator=info
+log4j.logger.lcsb.mapviewer.model.map.species.fields.AssociatedElementComparator=info
+
+log4j.logger.lcsb.mapviewer.model.map.layout.alias.SpeciesAliasComparator=info
+log4j.logger.lcsb.mapviewer.model.map.layout.alias.AliasComparator=info
+log4j.logger.lcsb.mapviewer.model.map.layout.alias.ComplexAliasComparator=info
+log4j.logger.lcsb.mapviewer.model.map.layout.alias.CompartmentAliasComparator=info
+
+log4j.logger.lcsb.mapviewer.model.map.reaction.ReactionNodeComparator=info
+log4j.logger.lcsb.mapviewer.model.map.reaction.ReactionComparator=info
+log4j.logger.lcsb.mapviewer.model.map.reaction.NodeOperatorComparator=info
+log4j.logger.lcsb.mapviewer.model.map.reaction.AbstractNodeComparator=info
+
+log4j.logger.lcsb.mapviewer.model.map.model.ModelComparator=info
+
+log4j.logger.lcsb.mapviewer.common.comparator=info
+log4j.logger.lcsb.mapviewer.model.graphics.PolylineDataComparator=info
\ No newline at end of file