debug added

annotation/src/main/java/lcsb/mapviewer/annotation/services/MiRNAParser.java

@@ -267,18 +267,26 @@ public class MiRNAParser extends CachableInterface implements IExternalService {
       } else {
         logger.debug("xls file with mirna in cache");
       }
+      logger.debug("breakpoint 1");
       String filename = bigFileCache.getAbsolutePathForFile(URL_SOURCE_DATABASE);
+      logger.debug("breakpoint 2");
       byte[] buffer = new byte[BUFFER_SIZE];
+      logger.debug("breakpoint 3");
       int len;
+      logger.debug("breakpoint 4");
       InputStream stream = new FileInputStream(new File(filename));
+      logger.debug("breakpoint 5 " + new File(filename).length());
       try {
         while ((len = stream.read(buffer)) > -1) {
+          logger.debug("breakpoint 6 " + len);
           this.sourceInputStream.write(buffer, 0, len);
         }
       } finally {
         stream.close();
       }
+      logger.debug("breakpoint 7");
       this.sourceInputStream.flush();
+      logger.debug("breakpoint 8");
     }
     return new ByteArrayInputStream(sourceInputStream.toByteArray());
   }