build of sbgnml module fixed

converter-SBGNML/build.xml

-<?xml version="1.0" encoding="UTF-8"?>
-<project name="SbgnmlConverter" default="main" basedir=".">
-	<property environment="env"/>
-	<property name="build.dir" value="target" />
-	<property name="mvn.home" value="${env.M2_HOME}" />
-	<property name="converter.name" value="sbgnml_converter" />
-
-	<target name="maven-build">
-		<exec executable="${mvn.home}/bin/mvn.cmd" >
-			 <arg line="clean" />
-		</exec>
-		<exec executable="${mvn.home}/bin/mvn.cmd" >
-			 <arg line="-Dmaven.test.skip=true install" />
-		</exec>
-	</target>
-
-	<target name="main" depends="maven-build"/>
-
-</project>
\ No newline at end of file

converter-SBGNML/install.xml

-<assembly xmlns="http://maven.apache.org/plugins/maven-assembly-plugin/assembly/1.1.2" 
-  xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-  xsi:schemaLocation="http://maven.apache.org/plugins/maven-assembly-plugin/assembly/1.1.2 http://maven.apache.org/xsd/assembly-1.1.2.xsd">
-  <id>jar-with-dependencies</id>
-  <formats>
-    <format>jar</format>
-  </formats>
-  <includeBaseDirectory>false</includeBaseDirectory>
-  <dependencySets>
-    <dependencySet>
-      <outputDirectory>/</outputDirectory>
-      <useProjectArtifact>true</useProjectArtifact>
-      <unpack>true</unpack>
-      <scope>runtime</scope>
-      <excludes>
-      	
-      </excludes>
-			<unpackOptions>
-      	<excludes>
-        	<exclude>**/log4j2.xml</exclude>
-          <exclude>**/log4j2.properties</exclude>
-				</excludes>
-      </unpackOptions>      
-    </dependencySet>
-  </dependencySets>
-  
-  <files>
-  	<file>
-    	<source>src/main/resources/log4j2.properties</source>
-			<outputDirectory>.</outputDirectory>
-      <destName>log4j2.properties</destName>
-		</file>
-	</files>
-</assembly>
\ No newline at end of file

converter-SBGNML/pom.xml

@@ -9,31 +9,6 @@
 	</parent>
 	<artifactId>converter-SBGNML</artifactId>
 
-	<build>
-		<plugins>
-			<plugin>
-				<artifactId>maven-assembly-plugin</artifactId>
-				<executions>
-					<execution>
-						<id>make-assembly</id> <!-- this is used for inheritance merges -->
-						<phase>package</phase> <!-- bind to the packaging phase -->
-						<goals>
-							<goal>single</goal>
-						</goals>
-						<configuration>
-							<descriptor>install.xml</descriptor>
-							<archive>
-								<manifest>
-									<mainClass>lcsb.mapviewer.converter.model.sbgnml.console.SbgnmlConsoleConverter</mainClass>
-								</manifest>
-							</archive>
-						</configuration>
-					</execution>
-				</executions>
-			</plugin>
-		</plugins>
-	</build>
-
 	<repositories>
 		<repository>
 			<id>central</id>