parsing of species kinetics parameters added (be3c8353) · Commits · minerva / core

Commit be3c8353 authored 7 years ago by Piotr Gawron

Browse files

parsing of species kinetics parameters added

parent d40b3f05

No related branches found

No related tags found

1 merge request!186Resolve "upload of sbml"

Expand all Hide whitespace changes

Inline Side-by-side

Showing

converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/species/SpeciesSbmlParser.java 594 additions, 577 deletions

...nverter/model/celldesigner/species/SpeciesSbmlParser.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerGenericProtein.java 48 additions, 49 deletions

...el/celldesigner/structure/CellDesignerGenericProtein.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerProtein.java 132 additions, 132 deletions

...ter/model/celldesigner/structure/CellDesignerProtein.java
converter-CellDesigner/src/main/java/lcsb/mapviewer/converter/model/celldesigner/structure/CellDesignerSpecies.java 507 additions, 459 deletions

...ter/model/celldesigner/structure/CellDesignerSpecies.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/ComplexParserTests.java 19 additions, 0 deletions

...ewer/converter/model/celldesigner/ComplexParserTests.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/species/SpeciesSbmlParserTest.java 1086 additions, 1042 deletions

...ter/model/celldesigner/species/SpeciesSbmlParserTest.java
converter-CellDesigner/src/test/java/lcsb/mapviewer/converter/model/celldesigner/structure/SpeciesTest.java 334 additions, 313 deletions

...r/converter/model/celldesigner/structure/SpeciesTest.java
converter-CellDesigner/testFiles/elements_with_kinetic_data.xml 117 additions, 0 deletions

...ter-CellDesigner/testFiles/elements_with_kinetic_data.xml
converter-CellDesigner/testFiles/kinetics/species_with_kinetics_param.xml 11 additions, 0 deletions

...signer/testFiles/kinetics/species_with_kinetics_param.xml
converter-CellDesigner/testFiles/kinetics/species_with_kinetics_param2.xml 11 additions, 0 deletions

...igner/testFiles/kinetics/species_with_kinetics_param2.xml
model/src/main/java/lcsb/mapviewer/model/map/species/GenericProtein.java 39 additions, 39 deletions

...java/lcsb/mapviewer/model/map/species/GenericProtein.java
model/src/main/java/lcsb/mapviewer/model/map/species/Protein.java 97 additions, 96 deletions

...c/main/java/lcsb/mapviewer/model/map/species/Protein.java
model/src/main/java/lcsb/mapviewer/model/map/species/Species.java 55 additions, 6 deletions

...c/main/java/lcsb/mapviewer/model/map/species/Species.java
model/src/main/java/lcsb/mapviewer/model/map/species/SpeciesComparator.java 4 additions, 4 deletions

...a/lcsb/mapviewer/model/map/species/SpeciesComparator.java
model/src/test/java/lcsb/mapviewer/AllTests.java 2 additions, 2 deletions

model/src/test/java/lcsb/mapviewer/AllTests.java
model/src/test/java/lcsb/mapviewer/model/map/species/ElementComparatorTest.java 290 additions, 291 deletions

...sb/mapviewer/model/map/species/ElementComparatorTest.java
model/src/test/java/lcsb/mapviewer/model/map/species/SpeciesComparatorTest.java 241 additions, 241 deletions

...sb/mapviewer/model/map/species/SpeciesComparatorTest.java
persist/src/test/java/lcsb/mapviewer/persist/dao/map/layout/alias/AliasDaoTest2.java 279 additions, 279 deletions

...mapviewer/persist/dao/map/layout/alias/AliasDaoTest2.java
service/src/main/java/lcsb/mapviewer/services/search/data/FullAliasView.java 607 additions, 607 deletions

...va/lcsb/mapviewer/services/search/data/FullAliasView.java

with 4473 additions and 4137 deletions

Please register or to comment