Commits · 2592fc749ff64e85653bf04c367f2d6b194824d8 · minerva / core · GitLab

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Feb 13, 2018
- optimization: model.getBioEntities is computed per call - changing order increase speed by 2 · 8628ce0e
  Piotr Gawron authored 7 years ago
  
  8628ce0e
- colorSchema simplified - it contains set of miriam data extracted from user... · 38a94dbf
  Piotr Gawron authored 7 years ago
  
  colorSchema simplified - it contains set of miriam data extracted from user input insted of preparsed information
  38a94dbf
- fix on matching reactions · 3f3fd7fd
  Piotr Gawron authored 7 years ago
  
  3f3fd7fd
Feb 12, 2018
- when species have no dimension the dimension is set for them · f8f31f96
  Piotr Gawron authored 7 years ago
  
  f8f31f96
- parsing of reaction type from SBO term added · 4fbcf273
  Piotr Gawron authored 7 years ago
  
  4fbcf273
- copying of model includes information about kinetics, functions, parameters · d2c2cd10
  Piotr Gawron authored 7 years ago
  
  d2c2cd10
- sbml parser is available via rest API · 387d7597
  Piotr Gawron authored 7 years ago
  
  387d7597
- export of sbml reaction with few graphical representation handled · 97f0c33a
  Piotr Gawron authored 7 years ago
  
  97f0c33a
- export of sbml reaction without layout · 836994f3
  Piotr Gawron authored 7 years ago
  
  836994f3
- simple layout algorithm implemented · 156a4eae
  Piotr Gawron authored 7 years ago
  
  156a4eae
Jan 25, 2018
- there is uniform way of storing BioEntity id in color schema · 4b9a0e62
  Piotr Gawron authored 7 years ago
  
  4b9a0e62
- common functionality for match and apply coloring added · 7a031fdc
  Piotr Gawron authored 7 years ago
  
  7a031fdc
- test file modifed to produce less warnings · e3f520f1
  Piotr Gawron authored 7 years ago
  
  e3f520f1
- allow to filter by element id · 77cf9226
  Piotr Gawron authored 7 years ago
  
  77cf9226
- color schema can include model name · 28e88325
  Piotr Gawron authored 7 years ago
  
  28e88325
Nov 20, 2017
- allow filtering by protein class (that is super class for all types of proteins) · 605b2066
  Piotr Gawron authored 7 years ago
  
  605b2066
- unit test shouldn';t log to file · 801c885c
  Piotr Gawron authored 7 years ago
  
  801c885c
Oct 26, 2017
- basic plugin interface · 675dfe89
  Piotr Gawron authored 7 years ago
  
  675dfe89
Oct 17, 2017
- verify annotations dialog implemented · 389369e3
  Piotr Gawron authored 7 years ago
  
  389369e3
- user API for updating user privileges · 92c7804e
  Piotr Gawron authored 7 years ago
  
  92c7804e
- organizing imports · bfbaeaf2
  Piotr Gawron authored 7 years ago
  
  bfbaeaf2
- overview images moved to project from top model · e1ef9be1
  Piotr Gawron authored 7 years ago
  
  e1ef9be1
- model version moved to project · 0d44e22a
  Piotr Gawron authored 7 years ago
  
  0d44e22a
Sep 26, 2017
- verify annotations dialog implemented · 1d1e8303
  Piotr Gawron authored 7 years ago
  
  1d1e8303
Sep 25, 2017
- build-deploy fixed on linux · aadf87c8
  Piotr Gawron authored 7 years ago
  
  aadf87c8
Aug 09, 2017
- organizing imports · 390326a9
  Piotr Gawron authored 7 years ago
  
  390326a9
- overview images moved to project from top model · ee2fc09b
  Piotr Gawron authored 7 years ago
  
  ee2fc09b
Aug 08, 2017
- model version moved to project · 7e7f83a6
  Piotr Gawron authored 7 years ago
  
  7e7f83a6
Aug 01, 2017
- warnings removal · dd1786e8
  Piotr Gawron authored 7 years ago
  
  dd1786e8
Jul 25, 2017
- simple upload uses different color then min/max value of the overlay · 3ab57631
  Piotr Gawron authored 7 years ago
  
  3ab57631
Jun 29, 2017
- export to png works for semantic zoom · 7b8778b7
  Piotr Gawron authored 7 years ago
  
  7b8778b7
Jun 28, 2017
- unnecessary casting removed · cc1a2c3f
  Piotr Gawron authored 7 years ago
  
  cc1a2c3f
- Model.getAnnotatedObejcts renamed to getBioEntities · 7a2352d1
  Piotr Gawron authored 7 years ago
  
  7a2352d1
- hierarchi is not influenced by previously set visibility levels · 8abcb6a4
  Piotr Gawron authored 7 years ago
  
  8abcb6a4
- semantic zooming and hierarchy visualizaion are unified on the model level · 05944698
  Piotr Gawron authored 7 years ago
  
  05944698
Jun 26, 2017
- AnnotatedObject renamed to BioEntity · d09f5464
  Piotr Gawron authored 7 years ago
  
  d09f5464
Jun 20, 2017
- copying adds information about comaprtments properly · e5bcb7f4
  Piotr Gawron authored 7 years ago
  
  e5bcb7f4
Jun 15, 2017
- Added dummy files to fit class paths and modified parent .classpath · 9de1f149
  David Hoksza authored 7 years ago
  
  9de1f149
Oct 27, 2016
- issue #10 - sbgn format moved from model to project · cff9d812
  Piotr Gawron authored 8 years ago
  
  cff9d812
- model warnings moved to project (issue #9 ) · 24d6947d
  Piotr Gawron authored 8 years ago
  
  24d6947d