Commits · 4de4e43d8f6ce8757eea97ad16ce4d5bcc43ad89 · minerva / core · GitLab

Snippets Groups Projects

Feb 12, 2018
- Merge branch '95-upload-of-sbml' into 'master' · 4de4e43d
  Piotr Gawron authored 7 years ago
  
  Resolve "upload of sbml" Closes #95 See merge request piotr.gawron/minerva!186
  4de4e43d
- aftre refreshing mathml tags mathjax is called to process them again · 385d6236
  Piotr Gawron authored 7 years ago
  
  385d6236
- info abot const, boundarycond is passed properly via api · 8055c151
  Piotr Gawron authored 7 years ago
  
  8055c151
- info about constant, boundary cond is passed up properly · 2f2c79b8
  Piotr Gawron authored 7 years ago
  
  2f2c79b8
- visualization of kinetics elements · 4b4b1c4b
  Piotr Gawron authored 7 years ago
  
  4b4b1c4b
- fix on kinetics in reactions with complex modifiers · b5a4d8a7
  Piotr Gawron authored 7 years ago
  
  b5a4d8a7
- visualization of sbml kinetic parameters · 475c4384
  Piotr Gawron authored 7 years ago
  
  475c4384
- sbml function mathML is parsed properly · a3129c01
  Piotr Gawron authored 7 years ago
  
  a3129c01
- visualzization of functions for kinetic law added · b7b14d24
  Piotr Gawron authored 7 years ago
  
  b7b14d24
- sbml function data struct · 304907f1
  Piotr Gawron authored 7 years ago
  
  304907f1
- reopening info window with kinetics will invoke mathjax reprocess code · 185228bb
  Piotr Gawron authored 7 years ago
  
  185228bb
- frontend visualization of kinetic law · 178b71b6
  Piotr Gawron authored 7 years ago
  
  178b71b6
- reaction contains kinetic law info · d627c4fe
  Piotr Gawron authored 7 years ago
  
  d627c4fe
- api for accessing reaction kinetic law · d624b6a1
  Piotr Gawron authored 7 years ago
  
  d624b6a1
- configuration returns information about unit types · ad9c2a5c
  Piotr Gawron authored 7 years ago
  
  ad9c2a5c
- rest API for units · 76e497fd
  Piotr Gawron authored 7 years ago
  
  76e497fd
- rest API for sbml functions · cdf52aec
  Piotr Gawron authored 7 years ago
  
  cdf52aec
- rest api for sbml functions · a046d06b
  Piotr Gawron authored 7 years ago
  
  a046d06b
- renaming of methods · 1678d950
  Piotr Gawron authored 7 years ago
  
  1678d950
- when species have no dimension the dimension is set for them · f8f31f96
  Piotr Gawron authored 7 years ago
  
  f8f31f96
- export of modifier type added · 0e9f18f5
  Piotr Gawron authored 7 years ago
  
  0e9f18f5
- export of reaction type added · e4ad45eb
  Piotr Gawron authored 7 years ago
  
  e4ad45eb
- export of species type added · 8aae41bc
  Piotr Gawron authored 7 years ago
  
  8aae41bc
- export of annotations added · 388ff9b0
  Piotr Gawron authored 7 years ago
  
  388ff9b0
- parsing of reaction type from SBO term added · 4fbcf273
  Piotr Gawron authored 7 years ago
  
  4fbcf273
- parsing of sbo terms for modifiers added · 791b6faf
  Piotr Gawron authored 7 years ago
  
  791b6faf
- reaction parser moved to separate package · 7270520e
  Piotr Gawron authored 7 years ago
  
  7270520e
- species types are assigned based on sbo terms · c9d686ee
  Piotr Gawron authored 7 years ago
  
  c9d686ee
- unit tests for parsing sbo terms into species type · 6f47fe03
  Piotr Gawron authored 7 years ago
  
  6f47fe03
- species parser extracted to separte package · 17ba584e
  Piotr Gawron authored 7 years ago
  
  17ba584e
- parsing of annotation added · d9928f4b
  Piotr Gawron authored 7 years ago
  
  d9928f4b
- unit test fixed (model doesnt allow reaction with duplicated ids) · 5fb25548
  Piotr Gawron authored 7 years ago
  
  5fb25548
- annotatio test files moved to converter · 79f18377
  Piotr Gawron authored 7 years ago
  
  79f18377
- xml parser moved to converter (so all converter have access to it) · 5f57c4bc
  Piotr Gawron authored 7 years ago
  
  5f57c4bc
- unit tests fixed - it's not allowed to have reactions with the same id in the model · dba2e36a
  Piotr Gawron authored 7 years ago
  
  dba2e36a
- copying kinetics shouldn't copy elements · 2e358315
  Piotr Gawron authored 7 years ago
  
  2e358315
- new constructors added (with reaction id arg) · 1a11a841
  Piotr Gawron authored 7 years ago
  
  1a11a841
- copying of model includes information about kinetics, functions, parameters · d2c2cd10
  Piotr Gawron authored 7 years ago
  
  d2c2cd10
- persistence annotations added · 8be2e056
  Piotr Gawron authored 7 years ago
  
  8be2e056
- import export of sbml functions and parameters · f08cfc1e
  Piotr Gawron authored 7 years ago
  
  f08cfc1e