WIP: Checkpoint snakefile

2019_GDB/scripts/mmseq_plots_w_metaspades.R

@@ -50,7 +50,11 @@ Overlap <- expand.grid(  #generate all the combinations
     str_detect(category, sets %>% as.character()) ~ "Y",
     T ~ "N"
   ))
-Overlap[15,3] = "N"         # since metaspades overlaps also with metaspades_hybrid
+
+# since metaspades overlaps also with metaspades_hybrid removing false associations
+Overlap[15,3] = "N"
+Overlap[27,3] = "N"
+Overlap[35,3] = "N"
 
 # Upper-left plot
 upperleft <- Total %>%