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- 2019_GDB/rules/rules/ASSEMBLY_ANNOTATION_RULES 0 additions, 1099 deletions2019_GDB/rules/rules/ASSEMBLY_ANNOTATION_RULES
- 2019_GDB/rules/rules/BINNING_RULES 0 additions, 167 deletions2019_GDB/rules/rules/BINNING_RULES
- 2019_GDB/rules/rules/MAPPING_RULES 0 additions, 154 deletions2019_GDB/rules/rules/MAPPING_RULES
- 2019_GDB/rules/rules/METAT_RULES 0 additions, 121 deletions2019_GDB/rules/rules/METAT_RULES
- 2019_GDB/rules/rules/MMSEQ_RULES 0 additions, 136 deletions2019_GDB/rules/rules/MMSEQ_RULES
- 2019_GDB/rules/rules/TAXONOMY_RULES 0 additions, 73 deletions2019_GDB/rules/rules/TAXONOMY_RULES
- 2019_GDB/rules/rules/checkpoint_ASSEMBLY_ANNOTATION_RULES 0 additions, 1171 deletions2019_GDB/rules/rules/checkpoint_ASSEMBLY_ANNOTATION_RULES
- 2019_GDB/scripts/prepare_plot_files_w_metaspades.sh 1 addition, 1 deletion2019_GDB/scripts/prepare_plot_files_w_metaspades.sh
- 2019_GDB/scripts/scripts/calculate_methylation_frequency.py 0 additions, 79 deletions2019_GDB/scripts/scripts/calculate_methylation_frequency.py
- 2019_GDB/scripts/scripts/coverage.awk 0 additions, 11 deletions2019_GDB/scripts/scripts/coverage.awk
- 2019_GDB/scripts/scripts/mmseq_plots.R 0 additions, 145 deletions2019_GDB/scripts/scripts/mmseq_plots.R
- 2019_GDB/scripts/scripts/mmseq_plots_w_metaspades.R 0 additions, 148 deletions2019_GDB/scripts/scripts/mmseq_plots_w_metaspades.R
- 2019_GDB/scripts/scripts/move_results_folder.sh 0 additions, 6 deletions2019_GDB/scripts/scripts/move_results_folder.sh
- 2019_GDB/scripts/scripts/prepare_plot_files.sh 0 additions, 36 deletions2019_GDB/scripts/scripts/prepare_plot_files.sh
- 2019_GDB/scripts/scripts/prepare_plot_files_w_metaspades.sh 0 additions, 43 deletions2019_GDB/scripts/scripts/prepare_plot_files_w_metaspades.sh
- 2019_GDB/scripts/scripts/run_fastqc.py 0 additions, 34 deletions2019_GDB/scripts/scripts/run_fastqc.py
- 2019_GDB/scripts/scripts/run_snakemake.sh 0 additions, 4 deletions2019_GDB/scripts/scripts/run_snakemake.sh
- 2019_GDB/scripts/scripts/verify_cluster_specifications.sh 0 additions, 2 deletions2019_GDB/scripts/scripts/verify_cluster_specifications.sh
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