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Commit 2362a407 authored by Valentina Galata's avatar Valentina Galata
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updated sbatch.sh for GDB

parent c6afa55b
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1 merge request!76Merge "cleanup" branch with "master" branch
......@@ -22,9 +22,9 @@ ONTP_CORES=60
# snakemake file
ONTP_SMK="workflow/Snakefile"
# config file
ONTP_CONFIG="config/config.yaml" # USER INPUT REQUIRED
ONTP_CONFIG="config/GDB/config.yaml" # USER INPUT REQUIRED
# slurm config file
ONTP_SLURM="config/slurm.yaml"
ONTP_SLURM="config/GDB/slurm.yaml"
# slurm cluster call
ONTP_CLUSTER="-p {cluster.partition} -q {cluster.qos} {cluster.explicit} -N {cluster.nodes} -n {cluster.n} -c {threads} -t {cluster.time} --job-name={cluster.job-name}"
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