changed mapping, added polishing and (ave) cov (3981a117) · Commits · ESB / ONT_pilot_gitlab · GitLab

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3981a117

Commit 3981a117 authored 4 years ago by Valentina Galata

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changed mapping, added polishing and (ave) cov

parent d9fec571

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Changes 7

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Snakefile 8 additions, 10 deletions

Snakefile
config/config.yaml 8 additions, 7 deletions

config/config.yaml
config/slurm.yaml 25 additions, 0 deletions

config/slurm.yaml
workflow/rules/assembly.smk 51 additions, 1 deletion

workflow/rules/assembly.smk
workflow/rules/mapping.smk 72 additions, 40 deletions

workflow/rules/mapping.smk
workflow/steps/assembly.smk 32 additions, 2 deletions

workflow/steps/assembly.smk
workflow/steps/mapping.smk 1 addition, 19 deletions

workflow/steps/mapping.smk

with 197 additions and 79 deletions

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