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Commit c574d4e1 authored by Valentina Galata's avatar Valentina Galata
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config/import clean-up: analysis

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2 merge requests!69Add PlasFlow and RGI,!67WIP: Checkpoint snakefile
......@@ -6,17 +6,7 @@
# 5. CRISPRS - via 'minced' and 'CASC'
# 6. Plasmids
import os
from tempfile import TemporaryDirectory
BARCODES=config["barcodes"]
ASSEMBLERS = config["assemblers"]
MAPPERS=["bwa", "mmi"]
# SAMPLES=config["samples"]
SAMPLES=["ONT3_MG_xx_Rashi_S11"]
BINNING_SAMPLES=config["binning_samples"]
HYBRID_ASSEMBLER=config["hybrid_assembler"]
############################################
######## Partial_vs_unique_ORFs ############
......
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