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Commit f54e24e7 authored by Susheel Busi's avatar Susheel Busi
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updated launcher file

parent 17bb9496
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2 merge requests!78Add zymo workflow,!77Workflow: Zymo - Comparison to Reference Genomes
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config/Zymo/sbatch.zymo.sh
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......@@ -42,6 +42,6 @@ snakemake -s ${ONTP_SMK} -rp --jobs 10 --local-cores 1 \
--cluster-config ${ONTP_SLURM} --cluster "${ONTP_CLUSTER}" --unlock
# run the pipeline
snakemake -s ${ONTP_SMK} -rpn --jobs 10 --local-cores 1 \
snakemake -s ${ONTP_SMK} -rp --jobs 10 --local-cores 1 \
--configfile ${ONTP_CONFIG} --use-conda --conda-prefix ${CONDA_PREFIX}/pipeline \
--cluster-config ${ONTP_SLURM} --cluster "${ONTP_CLUSTER}"
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