Figure: gene length distribution

Plot the gene length distribution of different assemblies.

changed milestone to %Analyses

added Analysis Figure labels

# shell command for a snakemake rule: gene/protein length
# input is prodigal FAA: header contains start/end positions
grep "^>" {input} | sed 's/\s#\s/\t/g' | awk -F'\t' '{{print ($3-$2+1) }}' > {output.gene}
grep "^>" {input} | sed 's/\s#\s/\t/g' | awk -F'\t' '{{print ($3-$2+1)/3 }}' > {output.prot}

changed title from Figure: protein length distribution to Figure: gene length distribution

changed the description

mentioned in commit 7cda6761

closed