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Commit 3691ca64 authored by Yohan Jarosz's avatar Yohan Jarosz
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correct stat output dir

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rules/Analysis/MGMT.rules
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......@@ -620,18 +620,18 @@ rule RENAME_STAT_OUTPUT:
preprocessed_mg('R2', dir=AN_OUT + '/stats/MG') + '_fastqc.html',
preprocessed_mg('SE', dir=AN_OUT + '/stats/MG') + '_fastqc.html'
output:
"stats/MT/MT.R1_preprocessed_fastqc.zip",
"stats/MT/MT.R2_preprocessed_fastqc.zip",
"stats/MT/MT.SE_preprocessed_fastqc.zip",
"stats/MT/MT.R1_preprocessed_fastqc.html",
"stats/MT/MT.R2_preprocessed_fastqc.html",
"stats/MT/MT.SE_preprocessed_fastqc.html",
"stats/MG/MG.R1_preprocessed_fastqc.zip",
"stats/MG/MG.R2_preprocessed_fastqc.zip",
"stats/MG/MG.SE_preprocessed_fastqc.zip",
"stats/MG/MG.R1_preprocessed_fastqc.html",
"stats/MG/MG.R2_preprocessed_fastqc.html",
"stats/MG/MG.SE_preprocessed_fastqc.html"
"{AN_OUT}/stats/MT/MT.R1_preprocessed_fastqc.zip",
"{AN_OUT}/stats/MT/MT.R2_preprocessed_fastqc.zip",
"{AN_OUT}/stats/MT/MT.SE_preprocessed_fastqc.zip",
"{AN_OUT}/stats/MT/MT.R1_preprocessed_fastqc.html",
"{AN_OUT}/stats/MT/MT.R2_preprocessed_fastqc.html",
"{AN_OUT}/stats/MT/MT.SE_preprocessed_fastqc.html",
"{AN_OUT}/stats/MG/MG.R1_preprocessed_fastqc.zip",
"{AN_OUT}/stats/MG/MG.R2_preprocessed_fastqc.zip",
"{AN_OUT}/stats/MG/MG.SE_preprocessed_fastqc.zip",
"{AN_OUT}/stats/MG/MG.R1_preprocessed_fastqc.html",
"{AN_OUT}/stats/MG/MG.R2_preprocessed_fastqc.html",
"{AN_OUT}/stats/MG/MG.SE_preprocessed_fastqc.html"
run:
for index, _file in enumerate(input):
shell("mv %s %s" % (_file, output[index]))
......
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