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Created with Raphaël 2.2.01May30Apr292524232217161497525Mar2120191864128Feb27231910986532131Jan2723222120131110987543219Dec1817161513121196425Nov181413126229Oct2714119328Sep27262524231913111024Aug231615141328Jun271130May30Apr3226Mar21632112Feb3129Jan2827262524161514927Dec261918161312119825Nov14543231Oct302922111018Sep1731Aug30242214824Jul2321201817326Jun198623May20151426Apr230Mar2013119628Feb242321191817161513121187530Jan2928272624231816121085231Dec3029211713128729Nov282517161587432126Oct25242111730Sep2827232216Merge pull request #69 from nkindlon/masterAdded unit test to merge to confirm precisionadded changes to stop CLANG compiler warnings.Merge pull request #68 from nkindlon/masterAdded stranded info to jaccard and merge help, fixed stranded jaccard bug[DOC] fix formatting for unionbedg[DOC] fix formatting for unionbedgMerge pull request #67 from nkindlon/masterAdded jaccard w/ -split and unit tests. Fixed Bam input as bam output bug, added unit test in sample.Merge pull request #64 from nkindlon/masterMade Merge only print Bed3 output for BAM, added unit testmerge bug fixes and unit testsTest commitUpdate BlockMgr.cppMerge pull request #63 from lindenb/fixBlockedIntervalssupport for operators 'X' and '=' in method BlockedIntervals.cpp/GetBamBlocksallow command line includes for makecleanup unit tests.cleanup KeyListOps help formattingadd missing help menu items (-S -header) to mergeallow merge -d to have negative values for minimum overlap.Merge pull request #53 from nkindlon/masterMerge branch 'merge'Final unit tests for merge, including stranded merge bug fixes.Merge branch 'merge'Unit tests and bug fixes for merge releaseFixed merge conflictsMerge branch 'master' of https://github.com/nkindlon/bedtools2Merge remote-tracking branch 'upstream/master' into mergeHandling empty files with headers[TST] run shuffle tests.[ENH] all shuffle with -incl to follow data distributionMerge converted to PFM, first check-infix most filetype issues. intersect still raises error with empty files.remove extraneous header tabtweak README[DOC] add new usage examples from the wild[DOC] add new usage examples from the wildMerge pull request #48 from Debian/suggestion-for-testsuiteAccess data via a DATA variable, allowing to override the location.