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Commit eb9a0cfd authored by Piotr Gawron's avatar Piotr Gawron
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rhea identifiers handled from recon

parent 3ee7533a
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2 merge requests!630WIP: Resolve "The privileges of a new user are not saved in some cases",!449rhea identifiers handled from recon
Pipeline #6729 passed
...@@ -527,6 +527,10 @@ public abstract class ElementAnnotator extends CachableInterface { ...@@ -527,6 +527,10 @@ public abstract class ElementAnnotator extends CachableInterface {
MiriamData md = createMiriamData(MiriamType.CHEMBL_COMPOUND, value); MiriamData md = createMiriamData(MiriamType.CHEMBL_COMPOUND, value);
element.addMiriamData(md); element.addMiriamData(md);
} }
protected void addRhea(BioEntity element, String value) {
MiriamData md = createMiriamData(MiriamType.RHEA, value);
element.addMiriamData(md);
}
/** /**
* Sets {@link BioEntity#getFormula()}. * Sets {@link BioEntity#getFormula()}.
......
...@@ -297,6 +297,8 @@ public class ReconAnnotator extends ElementAnnotator implements IExternalService ...@@ -297,6 +297,8 @@ public class ReconAnnotator extends ElementAnnotator implements IExternalService
addCas(annotatedObject, value); addCas(annotatedObject, value);
} else if (key.equals("chembl")) { } else if (key.equals("chembl")) {
addChemblCompound(annotatedObject, value); addChemblCompound(annotatedObject, value);
} else if (key.equals("rhea")) {
addRhea(annotatedObject, value);
} else if (key.equals("epa_id")) { } else if (key.equals("epa_id")) {
// for now we don't handle it // for now we don't handle it
continue; continue;
......
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