added quast and plasflow to report (issue #27) (f6e245e7) · Commits · ESB / ONT_pilot_gitlab · GitLab

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f6e245e7

Commit f6e245e7 authored 4 years ago by Valentina Galata

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added quast and plasflow to report (issue #27)

parent 37c82d2b

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1 merge request!76Merge "cleanup" branch with "master" branch

Changes 10

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report/Snakefile 18 additions, 89 deletions

report/Snakefile
report/envs/r.yaml 1 addition, 0 deletions

report/envs/r.yaml
report/rules/collect_data.smk 53 additions, 0 deletions

report/rules/collect_data.smk
report/scripts/report.R 64 additions, 0 deletions

report/scripts/report.R
report/scripts/report.Rmd 23 additions, 1 deletion

report/scripts/report.Rmd
report/scripts/report_render.R 10 additions, 0 deletions

report/scripts/report_render.R
report/scripts/utils.R 66 additions, 59 deletions

report/scripts/utils.R
report/scripts/utils.py 1 addition, 79 deletions

report/scripts/utils.py
report/scripts/utils.py 1 addition, 79 deletions

report/scripts/utils.py
workflow/scripts/utils.py 107 additions, 0 deletions

workflow/scripts/utils.py

with 344 additions and 307 deletions

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