Fixed constructor definition in closestBed.h. Caused compilation issues for Gordon Assaf.

src/closestBed/closestBed.cpp

@@ -13,8 +13,8 @@
 #include "closestBed.h"
 
 const int MAXSLOP = 256000000;  // 2*MAXSLOP = 512 megabases.
-			        // We don't want to keep looking if we
-			        // can't find a nearby feature within 512 Mb.
+			        			// We don't want to keep looking if we
+			        			// can't find a nearby feature within 512 Mb.
 const int SLOPGROWTH = 2048000;
 
 

src/closestBed/closestBed.h

@@ -27,7 +27,7 @@ class BedClosest {
 public:
 
 	// constructor 
-	BedClosest(string &bedAFile, string &bedAFile, bool &forceStrand, string &tieMode);
+	BedClosest(string &bedAFile, string &bedBFile, bool &forceStrand, string &tieMode);
 
 	// destructor
 	~BedClosest(void);
@@ -46,8 +46,6 @@ private:
 	BedFile *_bedA, *_bedB;
 	
 	// methods
-	void reportA(const BED &);
-	void reportB(const BED &);
 	void reportNullB();
 	void FindWindowOverlaps(BED &, vector<BED> &);