Commits · 2dada21d497c0ac4494bbc65981c7053cee1fa00 · minerva / core · GitLab

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Jan 11, 2019
- move command slightly refactored to enforced proper classes in the constructor · 2dada21d
  Piotr Gawron authored 6 years ago
  
  2dada21d
Jan 03, 2019
- layout also layout modification residues if present and without layout · b04fef5d
  Piotr Gawron authored 6 years ago
  
  b04fef5d
Nov 14, 2018
- proper operator types for specific reaction types · 3e2f8826
  Piotr Gawron authored 6 years ago
  
  3e2f8826
Nov 12, 2018
- layout moved to project and layout contains set of image layers if necessary · b71000ee
  Piotr Gawron authored 6 years ago
  
  b71000ee
Nov 07, 2018
- proper operator type is used for heterodimer association · 688be9a5
  Piotr Gawron authored 6 years ago
  
  688be9a5
Oct 31, 2018
- merge seantic-zoom changes into master · 374b55fd
  Piotr Gawron authored 6 years ago
  
  374b55fd
- custom semantic zooming is always processed · 9cde9780
  Piotr Gawron authored 6 years ago
  
  9cde9780
- fix on copy command test - reaction requires products/reactants · 8f1c6ba2
  Piotr Gawron authored 6 years ago
  
  8f1c6ba2
Oct 19, 2018
- removing all // that are not comments · 14aed039
  Sascha Herzinger authored 6 years ago
  
  14aed039
Oct 17, 2018
- ignore bin folder · 3be2e6cd
  Piotr Gawron authored 6 years ago
  
  3be2e6cd
- eclipse configuration files removed · 193ce4a6
  Piotr Gawron authored 6 years ago
  
  193ce4a6
Oct 16, 2018
- junit dependecy included properly · 12c9e790
  Piotr Gawron authored 6 years ago
  
  12c9e790
Oct 11, 2018
- possibility to create submodel with explicitly defined list of elements · 216cebce
  Piotr Gawron authored 6 years ago
  
  216cebce
Sep 25, 2018
- parsing and processing background color for layer texts · 384243b2
  Piotr Gawron authored 6 years ago
  
  384243b2
- pathway color is used for font · 1a7fc855
  Piotr Gawron authored 6 years ago
  
  1a7fc855
Sep 19, 2018
- conflicting dependencies in libsbml · ded51f40
  David Hoksza authored 6 years ago
  
  ded51f40
- conflicting dependencies in libsbml · 4fd983ad
  David Hoksza authored 6 years ago
  
  4fd983ad
Sep 14, 2018
- custom semantic zoom can control transparency levels · f98d4cd1
  Piotr Gawron authored 6 years ago
  
  f98d4cd1
Aug 30, 2018
- new line characters unified to use linux standard · 97b985af
  Piotr Gawron authored 6 years ago
  
  97b985af
Jul 31, 2018
- selecting element by annotation type doesn't include annotator from which it was selected · 3f95ee99
  Piotr Gawron authored 6 years ago
  
  3f95ee99
Jul 12, 2018
- unit tests fixed + subclasses use proper discrimantor · d6fad8c4
  Piotr Gawron authored 6 years ago
  
  d6fad8c4
Jul 10, 2018
- protein modification has x,y coordinats instead of CellDesigner angle · 1fe7ff92
  Piotr Gawron authored 6 years ago
  
  1fe7ff92
Apr 23, 2018
- DataMining structure removed from the project · f38461ac
  Piotr Gawron authored 6 years ago
  
  f38461ac
Apr 11, 2018
- DataMining structure removed from the project · e3f31b9f
  Piotr Gawron authored 6 years ago
  
  e3f31b9f
Mar 30, 2018
- when importing data from sbml with layout define default text point for compartments properly · 5d0bc67e
  Piotr Gawron authored 7 years ago
  
  5d0bc67e
Mar 20, 2018
- when changing layout of comartment text point is modified · f99830f0
  Piotr Gawron authored 7 years ago
  
  f99830f0
- self reactions are layouted properly · 56cf1072
  Piotr Gawron authored 7 years ago
  
  56cf1072
Feb 20, 2018
- various style checking warnings fixed · b746ebaa
  Piotr Gawron authored 7 years ago
  
  b746ebaa
Feb 13, 2018
- optimization: model.getBioEntities is computed per call - changing order increase speed by 2 · 8628ce0e
  Piotr Gawron authored 7 years ago
  
  8628ce0e
- colorSchema simplified - it contains set of miriam data extracted from user... · 38a94dbf
  Piotr Gawron authored 7 years ago
  
  colorSchema simplified - it contains set of miriam data extracted from user input insted of preparsed information
  38a94dbf
- fix on matching reactions · 3f3fd7fd
  Piotr Gawron authored 7 years ago
  
  3f3fd7fd
Feb 12, 2018
- when species have no dimension the dimension is set for them · f8f31f96
  Piotr Gawron authored 7 years ago
  
  f8f31f96
- parsing of reaction type from SBO term added · 4fbcf273
  Piotr Gawron authored 7 years ago
  
  4fbcf273
- copying of model includes information about kinetics, functions, parameters · d2c2cd10
  Piotr Gawron authored 7 years ago
  
  d2c2cd10
- sbml parser is available via rest API · 387d7597
  Piotr Gawron authored 7 years ago
  
  387d7597
- export of sbml reaction with few graphical representation handled · 97f0c33a
  Piotr Gawron authored 7 years ago
  
  97f0c33a
- export of sbml reaction without layout · 836994f3
  Piotr Gawron authored 7 years ago
  
  836994f3
- simple layout algorithm implemented · 156a4eae
  Piotr Gawron authored 7 years ago
  
  156a4eae
Jan 25, 2018
- there is uniform way of storing BioEntity id in color schema · 4b9a0e62
  Piotr Gawron authored 7 years ago
  
  4b9a0e62
- common functionality for match and apply coloring added · 7a031fdc
  Piotr Gawron authored 7 years ago
  
  7a031fdc