changed init: LR can have FASTQ (instead of FAST5); updated configs (issue...
changed init: LR can have FASTQ (instead of FAST5); updated configs (issue #56); other minor changes
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- config/GDB/config.yaml 5 additions, 3 deletionsconfig/GDB/config.yaml
- config/GDB/slurm.yaml 1 addition, 1 deletionconfig/GDB/slurm.yaml
- config/Zymo-GridION-EVEN-BB-SN/config.yaml 5 additions, 3 deletionsconfig/Zymo-GridION-EVEN-BB-SN/config.yaml
- config/Zymo-GridION-EVEN-BB-SN/slurm.yaml 1 addition, 1 deletionconfig/Zymo-GridION-EVEN-BB-SN/slurm.yaml
- workflow/Snakefile 5 additions, 13 deletionsworkflow/Snakefile
- workflow/rules/basecalling.smk 45 additions, 0 deletionsworkflow/rules/basecalling.smk
- workflow/rules/init.smk 29 additions, 2 deletionsworkflow/rules/init.smk
- workflow/rules/preprocessing.smk 1 addition, 44 deletionsworkflow/rules/preprocessing.smk
- workflow/steps/preprocessing.smk 5 additions, 1 deletionworkflow/steps/preprocessing.smk
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