Sub-workflow: Use main pipeline in figure pipeline

Add the main pipeline as a sub-workflow in the figure snakemake file: use it for files containing data required to create figures/tables.

changed milestone to %Manuscript - initial version

added Analysis Clean Up Figure labels

marked this issue as related to #27 (closed)

removed Figure label

changed title from Sub-worflow: Use main pipeline in figure pipeline to Sub-workflow: Use main pipeline in figure pipeline

Decided against that: need to specify the same config file as used in the snakemake call but could not find how to do that

closed