Commits · 59c432ded15736d4123108aa29d0d7dd182fb60c · IMP-dev / IMP · GitLab

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Jul 07, 2015
- add readme on how to use docker · 59c432de
  Yohan Jarosz authored 9 years ago
  
  59c432de
- add if statement for vizbin · 30a35b48
  Yohan Jarosz authored 9 years ago
  
  30a35b48
- add docker Entrypoint · 8cb747e0
  Yohan Jarosz authored 9 years ago
  
  8cb747e0
- some error · b7cd78ee
  Yohan Jarosz authored 9 years ago
  
  b7cd78ee
- add typo · 327eb0a8
  Yohan Jarosz authored 9 years ago
  
  327eb0a8
- add -no-check-certificate flag · 70a1fdbf
  Yohan Jarosz authored 9 years ago
  
  70a1fdbf
- add new vizbin jar file · e042b12d
  Yohan Jarosz authored 9 years ago
  
  e042b12d
- Adjust memory parameter for sortmerna · 59a8a5b7
  Shaman Narayanasamy authored 9 years ago
  
  59a8a5b7
Jul 06, 2015
- Dynamic memory parameter for sortmerna · 51f533dc
  Shaman Narayanasamy authored 9 years ago
  
  51f533dc
- Add memory parameter to sortmerna. Fix #31 · 29e103ce
  Shaman Narayanasamy authored 9 years ago
  
  29e103ce
Jul 03, 2015
- Correct read group info for MT_MAPPING · 50e0d994
  Shaman Narayanasamy authored 9 years ago
  
  50e0d994
Jun 12, 2015
- Add new ANALYSIS_VIZBIN rule · 4a002ced
  Shaman Narayanasamy authored 9 years ago
  
  4a002ced
- Add perl script to filter length · 2dbf2b7b
  Shaman Narayanasamy authored 9 years ago
  
  2dbf2b7b
- Add comment on how to make Vizbin work. Still a little weird at the moment · 2103bc06
  Shaman Narayanasamy authored 9 years ago
  
  2103bc06
- Add new Vizbin to docker file (commented out for now) · 7f56713c
  Shaman Narayanasamy authored 9 years ago
  
  7f56713c
Jun 02, 2015
- quick fix kronaplots · defa92ec
  Yohan Jarosz authored 9 years ago
  
  defa92ec
- try lod krona · 50ce78c2
  Yohan Jarosz authored 9 years ago
  
  50ce78c2
- change table path · 1ed68937
  Yohan Jarosz authored 9 years ago
  
  1ed68937
- Create rule for MT krona plot · 4bbc79e2
  Shaman Narayanasamy authored 9 years ago
  
  4bbc79e2
- Using Larsson script to obtain pathway map information from KEGG · c5e51198
  Shaman Narayanasamy authored 9 years ago
  
  c5e51198
- Correct KEGG url. Again... · 3e6a71a0
  Shaman Narayanasamy authored 9 years ago
  
  3e6a71a0
- Merge branch 'dev' of ssh://git-r3lab-server.uni.lu:8022/shaman.narayanasamy/IMP into dev · eec202b7
  Shaman Narayanasamy authored 9 years ago
  
  eec202b7
- Correct KEGG download link · 38a2822e
  Shaman Narayanasamy authored 9 years ago
  
  38a2822e
- add a main · 46ab14ef
  Yohan Jarosz authored 9 years ago
  
  46ab14ef
- Merge branch 'dev' of ssh://git-r3lab-server.uni.lu:8022/shaman.narayanasamy/IMP into dev · a5d13a05
  Shaman Narayanasamy authored 9 years ago
  
  a5d13a05
- Correct krona table command · 73b09875
  Shaman Narayanasamy authored 9 years ago
  
  73b09875
Jun 01, 2015
- use PEP for python · 8577a035
  Yohan Jarosz authored 9 years ago
  
  8577a035
- typo · e6c2c80e
  Yohan Jarosz authored 9 years ago
  
  e6c2c80e
- Merge branch 'dev' of ssh://git-r3lab-server.uni.lu:8022/shaman.narayanasamy/IMP into dev · 89ff5d37
  Shaman Narayanasamy authored 9 years ago
  
  89ff5d37
- Edit krona plot rule · 2f16345f
  Shaman Narayanasamy authored 9 years ago
  
  2f16345f
- set output names · 9b7e6164
  Yohan Jarosz authored 9 years ago
  
  9b7e6164
- config names · 40486026
  Yohan Jarosz authored 9 years ago
  
  40486026
- change config names · 79ba1711
  Yohan Jarosz authored 9 years ago
  
  79ba1711
- Fix bug in pathway2hiererchy file cleaning · 744a0577
  Shaman Narayanasamy authored 9 years ago
  
  744a0577
- Merge branch 'dev' of ssh://git-r3lab-server.uni.lu:8022/shaman.narayanasamy/IMP into dev · 7a5d2782
  Shaman Narayanasamy authored 9 years ago
  
  7a5d2782
- Download and clean pathway2hierarchy information · f7c5c179
  Shaman Narayanasamy authored 9 years ago
  
  f7c5c179
- you can set the kegg url in config file · a5ee10eb
  Yohan Jarosz authored 9 years ago
  
  a5ee10eb
- Remove temp ec2pathway file · fccacd41
  Shaman Narayanasamy authored 9 years ago
  
  fccacd41
- Clean ec2pathway output · d8c1bfaf
  Shaman Narayanasamy authored 9 years ago
  
  d8c1bfaf
- change kegg download rule · 9842acc4
  Yohan Jarosz authored 9 years ago
  
  9842acc4